Reference

haystack(x, coord[, features, layer, dims, ...])	Runs singleCellHaystack.
cluster_genes(adata, haystack_result[, ...])	Cluster singleCellHaystack results into gene modules.
plot_rand_fit(x[, type])	Plot singleCellHaystack randomization information.
plot_pval_rank(x)	Plot singleCellHaystack p.value rank.
plot_pval_hist(x)	Plot singleCellHaystack p.value histogram.
plot_gene_clusters(adata, gene_clusters[, ...])	Plot gene clusters returned by cluster_genes.
plot_compare_ranks(res1, res2[, sort_by, ...])	Plot the rank of two singleCellHaystack results.