All functions

choose_celltype()

choose_celltype

get_celltype()

Returns a list of the celltypes available in the specified dictionary.

get_db()

get_db

get_markers()

get_markers

get_tissue()

Returns a list of the tissues available in the specified dictionary.

immgen.db

Immune cell dictionary from Immgen.

immnav.db

Immune cell dictionary from Immuno-Navigator.

markers

Immune cell markers

mca.db

Cell type dictionary from MCA.

predict_celltype()

predict_celltyp

sce1

SingleCellExperiment example dataset.

simplify_immgen_celltype()

simplify_immgen_celltype

to_matrix()

to_matrix