plot_purity — plot_purity • scmisc

Plot heatmap of purity index of specified columns.

plot_purity(x, ...)

# S3 method for Seurat
plot_purity(x, col.x, col.y, ...)

# S3 method for SingleCellExperiment
plot_purity(x, ...)

# S3 method for DataFrame
plot_purity(x, ...)

# S3 method for data.frame
plot_purity(x, col.x, col.y, label = FALSE, label.size = 5, drop = FALSE, ...)

Arguments

x: a suitable object.
...: parameters passed down to methods.
col.x: name of column to be use in x-axis.
col.y: name of column to be use in y-axis.
label: logical; whether to add rounded values of purity to tiles.
label.size: size of labels text.
drop: whether to drop unused axis levels.