filter_genes

filter_genes

filter_genes(x, ...)

# S3 method for SingleCellExperiment
filter_genes(x, min.cells = 10, min.count = 0, assay.name = "counts", ...)

# S3 method for matrix
filter_genes(x, min.cells = 10, min.count = 0, ...)

Arguments

x

object to filter.

...

arguments passed down to methods.

min.cells

minimum number of cells with min.count for gene to be preserved.

min.count

minimum number of counts to be considered expressed.

assay.name

name of assay to obtain matrix of counts.