Compute the conservation score matrix from a MSA

Compute the conservation score matrix from a multiple sequence alignment (MSA) according to the method described in the software Jalview (htt://www.jalview.org).

conservationMatrix(object)

# S4 method for AAMultipleAlignment
conservationMatrix(object)

Arguments

object	AAMultipleAlignment alignment object (or a matrix).

Examples

NULL
#> NULL